Gossypium hirsutum cri assembly
WebAssembly : dbVar : Genetic Testing Registry : ... Gossypium hirsutum subsp. latifolium Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for … WebGossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1. Method. SOAPdenovo (12) Source. Illumina HiSeq 2000 reads from various insert size libraries (NAU-NBI) Date performed. 2015-04-20. About the assembly. An allohaploid plant was derived from the allotetraploid cotton (TM-1) and used for genome sequencing. 612 Gb (245× genome …
Gossypium hirsutum cri assembly
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WebApr 20, 2024 · Sequencing, assembly and annotation. ... Zhang, T. et al. Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement. Nat. WebSource. Illumina HiSeq 2000 reads from various insert size libraries (CGP-BGI) Date performed. 2015-04-20. About the assembly. The allotetraploid genome of Upland cotton G. hirsutum TM-1 has been estimated, using various methods, as 2.25–2.43 Gb. A total of 445.7 Gb, or 181-fold haploid genome coverage, of raw paired-end Illumina reads by ...
WebAug 10, 2024 · The pigment gland is a morphological characteristic of Gossypium and its related genera.Gossypium bickii (G 1) is characterized by delayed pigment gland morphogenesis in the cotyledons.In this study, a reference-grade genome of G 1 was generated, and comparative genomics analysis showed that G 1 was closest to … WebAug 5, 2024 · Gossypium raimondii, the putative contributor of the D subgenome of upland cotton (G. hirsutum), highlights the need to improve the genome quality rapidly and …
WebGossypium hirsutum (AD1) 'ZM24' genome CRI_v1: 2024-08-28 : InterProScan Analysis for ZM24-CRI v1.0.a1 Gossypium hirsutum proteins: 2024-09-18 : BLASTP of ZM24-CRI v1.0.a1 Gossypium hirsutum proteins vs UniProt Swissprot: 2024-09-19 : BLASTP of ZM24-CRI v1.0.a1 Gossypium hirsutum proteins vs arabidopsis Araport11: 2024-09-19 WebG. hirsutum accession number CRI-12 was developed by our research institute, cotton research institute (CRI), Chinese Academy of Agricultural Sciences, thus the code CRI. The accession AD3-00 (P0601211) of G. tomentosum was used as the male donor parent, it was collected from its natural habitat from the dry and rocky coastal areas of the ...
WebJun 8, 2024 · Data sources and processing Genome assemblies and gene annotations. Seven cotton genome assemblies representing four Gossypium species and their respective gene annotations were downloaded from relevant database websites (Additional file 1).After checking the annotation consistency between the GFF files and the provided …
WebGhicr24_A05G005600.1.exon.1_CRI-ZM24_v1: Gossypium hirsutum: exon: Analyses. This mRNA is derived from or has results from the following analyses. Analysis Name Date Performed; ... Assembly Species; ghzghzL1144: Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1: Gossypium hirsutum: ghzgkR2028: Gossypioides kirkii genome … charcoal powder making machineWebJun 20, 2024 · Introduction. Cotton is an appealing model for investigating polyploid origins, evolution, and domestication. Diversity in Gossypium increased by transoceanic, long-distance dispersal and broad hybridization among lineages that are currently geographically separated.Gossypium hirsutum L. (AD1) and Gossypium barbadense L. (AD2) are … charcoal powder glue face maskWebThe genus Gossypium comprises of several different cotton species. It is a major agronomic fiber crop and an important oilseed that is native to the tropics and the warm temperate … harriet wrigleyWebAug 9, 2024 · About the assembly. In this study, we applied Oxford Nanopore sequencing technology to assemble G. rotundifolium (K 2 *) 'K201', G. arboreum (A 2) 'SXY1' and G. raimondii (D 5) 'D502' genomes. G. arboreum and G. raimondii genomes have been de novo assembled previously using Illumina and PacBio reads, but both genomes have a … harriet wright pueblo coloradoWebCotton ( Gossypium hirsutum) is mainly grown for its fiber, and its seeds are collected as byproducts. Cottonseed oil content is low (20%), but due to large amounts of cotton … harriet yarbrough obituaryWebAssembly Species; abhnL1974: Gossypium arboreum (A2) 'SXY1' genome CGP-BGI_v2_a1 ... Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1: Gossypium hirsutum: ghzhnL0459: Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1: ... A0A1U8KDM7_GOSHI (1-aminocyclopropane-1-carboxylate synthase 9-like … harriet wright ruffinWebresources has whetted the appetite for more Gossypium SNPs, especially ones directly applicable to research and breeding of tetraploid cotton. In the current study, we report … harriet yasnor facebook